HDF  ?`TREEHEAPXminc-2.0@pTREE HEAPX(dimensionsinfoimage0SNOD HhPp TREE-HEAPX yspacezspacexspace8SNOD(Pp 80 X x X x TREE@HEAPX processing@8TREEpHEAPXX0HTREE9HEAPX0image-maximage-minimage(SNOD# Pident.kwagstyl:ace-ws-80:2018.08.09.13.41.37:2410:1 |l[ Htransformation0-filename nl0301.xfmH @SNOD( ptransformation0-filedata5MNI Transform File %Thu Aug 9 10:50:05 2018>>> minctracc -clobber -nonlinear corrcoeff -stiffness 1 -similarity 0.01 -iterations 5 -weight 0.9 -step 0.0625 0.0625 1 -sub_lattice 5 -lattice_diam 0.1875 0.1875 1 -transformation /tmp/slicenlreg_grad_nov2014.pl-x4WDAJ1D/SSlice0301_padded_blur_9.xfm /tmp/slicenlreg_grad_nov2014.pl-x4WDAJ1D/SSlice0301_padded_blur_0.0625_dxyz.mnc /tmp/slicenlreg_grad_nov2014.pl-x4WDAJ1D/Tpm0301_native_0.0625_dxyz.mnc nl0301.xfm %(Package mni_autoreg 0.99.7, compiled by @ace-ws-35 (x86_64-unknown-linux-gnu) on Wed Oct 28 15:41:21 EDT 2015) Transform_Type = Linear; Linear_Transform = 1.02931010723114 -0.120949074625969 0 -0.000594143115449697 0.0942253470420837 0.988989293575287 0 6.37431478500366 0 0 1 0; Transform_Type = Grid_Transform; Displacement_Volume = nl0301_grid_0.mnc; Htransformation1-filenamepm0301_mri.xfm transformation1-filedataAMNI Transform File %Tue May 6 14:17:09 2014>>> minctracc -clobber -nonlinear corrcoeff -stiffness 1 -similarity 0.05 -iterations 25 -weight 0.2 -step 4 4 1 -sub_lattice 10 -lattice_diam 10 10 1 -transformation /ltmp/lepagecl/histomri_slicenlreg.pl-VWM2loBz/Spm0710o_2.xfm /ltmp/lepagecl/histomri_slicenlreg.pl-VWM2loBz/Spm0710o_2_blur.mnc /ltmp/lepagecl/histomri_slicenlreg.pl-VWM2loBz/Tmri_0710_2_blur.mnc /home/lepagecl/scratch_mp/BIGBRAIN/pm3903//mri_transform/pm0710.xfm %(Package mni_autoreg 0.99.6, compiled by @ip03 (x86_64-unknown-linux-gnu) on Thu Jul 8 17:19:09 EDT 2010) Transform_Type = Linear; Linear_Transform = 0.993105471134186 -0.117224365472794 0 3.13043999671936 0.117224365472794 0.993105471134186 0 -0.595730006694794 0 0 1 0; Transform_Type = Grid_Transform; Displacement_Volume = pm0301_mri_grid_0.mnc; Htransformation2-filenamepm0301_nl.xfm transformation2-filedataeMNI Transform File %Wed Apr 8 03:44:39 2015>>> minctracc -clobber -nonlinear corrcoeff -stiffness 1 -similarity 0.01 -iterations 5 -weight 0.9 -step 0.0625 0.0625 1 -sub_lattice 5 -lattice_diam 0.1875 0.1875 1 -transformation /ltmp/lepagecl/slicenlreg_grad_nov2014.pl-dHkX6bYc/Spm0301o_9.xfm /ltmp/lepagecl/slicenlreg_grad_nov2014.pl-dHkX6bYc/Spm0301o_0.0625_dxyz.mnc /ltmp/lepagecl/slicenlreg_grad_nov2014.pl-dHkX6bYc/Tavg_0301_0.0625_dxyz.mnc /home/lepagecl/BIGBRAIN/pm3903//nl_transform/new/pm0301.xfm %(Package mni_autoreg 0.99.6, compiled by @ip03 (x86_64-unknown-linux-gnu) on Thu Jul 8 17:19:09 EDT 2010) Transform_Type = Linear; Linear_Transform = 0.998796880245209 0.000909684400539845 0 0.0947164446115494 -0.00261893169954419 0.995974659919739 0 0.0874106362462044 0 0 1 0; Transform_Type = Grid_Transform; Displacement_Volume = pm0301_nl_grid_0.mnc; Xtransformation3-filename/tmp/flipyz-ZwBBRC/flipyz.xfm transformation3-filedata\MNI Transform File Transform_Type = Linear; Linear_Transform = 1 0 0 0 0 0 1 0 0 1 0 0; Hh historyTue Aug 7 18:44:59 2018>>> minccalc -quiet -clob -unsigned -byte -expr A[0]+A[1] BigRegion1_alllayers.mnc BigRegion2_alllayers.mnc Slice0301_alllayers.mnc [kwagstyl@ace-ws-80:/data1/users/kwagstyl/bigbrain/Slice_Verification/V1/Slice_0301/] [2018-08-09 10:51:24] /data1/users/kwagstyl/quarantines/Linux-x86_64/bin/autocrop -clobber -quiet -extend 10,10 10,10 0,0 Slice0301_alllayers.mnc Slice0301_alllayerspadded.mnc Thu Aug 9 10:51:26 2018>>> mincresample -quiet -clob -like pm0301_native.mnc -unsigned -byte -nearest_neighbour -transformation nl0301.xfm Slice0301_alllayerspadded.mnc pm0301_alllayers.mnc Thu Aug 9 10:52:03 2018>>> mincresample -quiet -clob -like pm0301_nl.mnc -unsigned -byte -nearest_neighbour -transformation pm0301_mri.xfm pm0301_alllayers.mnc pm0301_alllayers_MRI.mnc Thu Aug 9 10:52:33 2018>>> mincresample -quiet -clob -like pm0301_nl.mnc -unsigned -byte -nearest_neighbour -transformation pm0301_nl.xfm pm0301_alllayers_MRI.mnc pm0301_alllayers_nl.mnc Thu Aug 9 13:40:52 2018>>> minccalc -clobber -short -quiet -expression if(abs(A[0]-11)<0.5) {1} else if(abs(A[0]-22)<0.5) {2} else if(abs(A[0]-33.5)<0.5) {3} else if(abs(A[0]-44.5)<0.5) {4} else if(abs(A[0]-55.5)<0.5) {4} else if(abs(A[0]-66.5)<0.5) {4} else if(abs(A[0]-77.5)<0.5) {4} else if(abs(A[0]-88.5)<0.5) {5} else if(abs(A[0]-100)<0.5) {5} else if(abs(A[0]-111)<0.5) {6} else if(abs(A[0]-122)<0.5) {6} else {0} pm0301_alllayers_nl.mnc /data1/users/kwagstyl/bigbrain/NeuralNetworks/TrainingData/V1/Slice_0301/pm0301_nl_classifiedsixlayers.mnc Thu Aug 9 13:41:36 2018>>> mincresample -quiet -clob -unsigned -short -nearest -use_input_sampling -transform /tmp/flipyz-ZwBBRC/flipyz.xfm -start -70.6666 -64 -58.7777 -nelements 6572 1 5711 -step 0.0211666666666666 0.02 0.0211666666666666 -range 0 65535 -keep_real_range /tmp/flipyz-ZwBBRC/flip_in.mnc /tmp/flipyz-ZwBBRC/flip_out.mnc Thu Aug 9 13:41:37 2018>>> mincresample -clob -nearest_neighbour -like /data1/users/kwagstyl/bigbrain/NeuralNetworks/TrainingData/V1/Slice_0301/block_blocks/slice_blocks.mnc /data1/users/kwagstyl/bigbrain/NeuralNetworks/TrainingData/V1/Slice_0301/tmp.mnc /data1/users/kwagstyl/bigbrain/NeuralNetworks/TrainingData/V1/Slice_0301/pm0301_nl_classifiedsixlayers_aligned.mnc 8/|l[ 0 length  8varidMINC standard variable 0vartypedimension____SNODH5,1 8versionMINC Version 1.0 X comments/Y increases from patient posterior to anterior 0spacing regular__ 0 alignmentcentre 8step ?@4 4{Gz? 8start ?@4 4P hdirection_cosines ?@4 4? (unitsmm 8 spacetype native____x |l[ 0 length  8varidMINC standard variable 0vartypedimension____ 8versionMINC Version 1.0 X comments.Z increases from patient inferior to superior 0spacing regular__ 0 alignmentcentre 8step ?@4 4{Gz? 8start ?@4 4?߾VM hdirection_cosines ?@4 4? (unitsmm 8 spacetype native____p |l[ 0 length  8varidMINC standard variable 0vartypedimension____ 8versionMINC Version 1.0 P comments'X increases from patient left to right 0spacing regular__ 0 alignmentcentre 8step ?@4 4{Gz? 8start ?@4 4yz,CQ hdirection_cosines ?@4 4? (unitsmm 8 spacetype native____  ?@4 4 deflate`B|l[ 0 dimorderyspace ;SNOD(?8; 8varidMINC standard variable 8versionMINC Version 1.0 0vartypevar_attribute  ?@4 4 deflateJ|l[ 0 dimorderyspace 8varidMINC standard variable 8versionMINC Version 1.0 0vartypevar_attributex^c` xYx^c` `8 deflate R@|l[ @ dimorderyspace,zspace,xspace 8varidMINC standard variable 0vartypegroup________ 8versionMINC Version 1.0 X valid_range ?@4 4@ 0 completetrue_TREE =TREE =TREE@b@x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^۹ 4H)@IawgڰO_o}:}*U;x^anIlr3~f=3b>;6Ѝ+1z]/GOp{ZK֧hw>%O[| N,3,{2m |UFSReD=5׆*s9pl2-G){ѓ`4=9u|>a:-_}ay?:KlMA+rl-~B[k;^y=\Ovg` mu WLFy5q.ު)sN*־rm9 U˵:F~+]z ~oӭg}\ӓE'\.m'>w(.398v/>Nzt`ں|]{̵;cI`ڱ\Ӧ#'8j:+[̮}%]3G?1Z`.mOuӮ1|iK`4G-еsۗOstFsޛt~ZK^ڈ'8_wNȺemzv`YS͡[_~iӕ%u^muX^ht&gxD;k{sʹʘN'ճ>Թ\vv[2iSEOrtgun7pmm6*s,vԝ%ڽ\;휲WU˴aN*X'ӱu̠ڪ\Hᬓ2Bڣ|5ŸuzJwdV=Q\Px$uƶMfnWRmG>kޯ7BMs]_~K xwnzԦΝ M;.3:ݳyn߫v|. N;ItқXm״hn0sxt#g{ x^{kѴ} {pN6lG#M|m絓hۖw݀qҝS.^yiW m3q&km>6)غ!?lp <6Szw&=Ǵ]uܿK?x|/>^1#- ch#q}m-wzvڂ{T~ߧiowܾwucOoY߰;6O[~.,{!X!Ex^ZOsxxB\6S[ P`_S%F^!c˷H]'mwFM 3isI{8."KGtĺָ6_{iLڙaz8msLVy SS}kx\]&A:NrX7|p[sFk:@MӾ౵*KgH:94;> vV9ZzGٛΏ-ҩwK{ec767NDexoٻN x=86ku<6N]g:cH'=w_IW{9}:%zN`ҏkcn*_s] ]wGsshtrCOyڏN|=?'3itAO~w=\_zFT-5:mm=ck?=}"vp};Kϋ:|K^?kSuzNG̵FPW|LdY?yO'2>7zvO J[nhgiwQ;M_O%yGb^[.gGOimMx;־ҿ[}"N6u#={v *ZlkkHi7{J]?sۥfO{6׶Жq63n~"5P6 <=Okcm}m߶hg2}o7\"kNuOk;xJ[`㴡ȵ+O ?ikwo~^7oz6;?@|VSg>B{keܔvt~^od${O't*=v6L[gjWp;>O44z+<s}tj0WosOi7xJ_MfiCpz=J_'܇}|{|t~0_IZ_\e혭ur]m>sLU?YZK XN >)~ Vٺ\#^!?3^T}wK{Tasg<ݯa'[W[kԼk7v_g|;~U\_[wTas'Z{_ôKv{K}w~y}or-C}c^?z{~}ʛ6^2N::|B¯uOckki+=r܉y8o3wxL vvi_l]}>׆e;7m)ߟ׿(tAW\'LgK̸i;iGl]m}6mV>j_t|Bnz9^{a~kznz}ژ֞vRߛgn[G{|fj%^wӆϝՐێw6\giK6v{i*WGf\pw .=JS:xG[~L`khc\Kҫ\[f_xu \{nZC[zKkm@.M5rm^zvo_ڻ s{Δ>JGN=qw{1{~Ԧֽ-Gb;Kk 7{q7O:~`+mopc-^aX+v{9;W~EW1˴'mc(^]8zO9:N+eik<~1|I+zu.-|QK)<ֶ6ɸ?{鵄qgtǬnΆ}>sp8lX]ᱶi;< eOs7!N^𓶅>~sx^wW 8NΒsw/zw֮Xo-^9g龞D9s:; v^5|^;7|L~\]6]0/iQ+N'VzWֶPwf[q-WgK:I6CW'X9iS8&Qx^mHzxxv+{tUKWwhw+4]6_nw^`^WtM;zu~?}Sge /16\y3U/}~O^;/o=]jg6M[}m6t%~Gr7_HpI=6xծo;7RI÷ԓ`]ݓ6[O'^/~;}L菉~7}o'vwІz:}簿[=Kx<3{9=ֵ/|ݓ[Og^t>~EI[ӷdXӾI;ïis6[Og^y,zӽ>>gk&?g6O~^\5N~I{glMN$'@-|FAzy0S`}6n=6F{=[[x_9G ~ONOUs}BN nhcxn]{ya]\wteGX:K5OlKz:1WwIZtzߓ>k9pAK >k Й[vڿ[Kp#Ys]随t{zߓ>k]6†A[w .7q=]Rw=N:t[z?>qpA' _>Fz%޽uGߗMOW2m7ҧ>_.hcx>>`ډ;hn~tM뺛_I錧g'9]7^ghu`UÓ?9Attחcj&zrxz6 3w{:0'Kvޣ9|J[o#~vIײF6Kӄ:r\=sxM/+16~Vi]LNOI' X׹m>I;[wZ`CYvڍ[;߼UL+욥urk];n\viyIw+im]̳A'{; ķNp٬>δ3kd%ica5]Ӊ7^Np<Ju3O[6'm o~:o嶖rMs)kuuMg3 7-n]uЈy«QܵVr_:#n YONL[Gm?>|Lhm5ٺ~<˫vUK'^s,g}?=}-۵|v:鴹'=5}w g>jsYf-6ז.2jt~u'={ӓV fIJsz \7ͬs2=s}7g>hoYFn.72j״W>K׼G?<~K: IϋuۖIQ~es5k?m~kNs<_.N m߳Y9;/ikǛLM=T?y7b3m8_lLz-e+>鮷OOO~t~;{a헝;X2t%9;K:;|j5L~O]*]tgT'}'0StuougUpA{ï'L}O]N:ggkK:<Ǔ]7gw֙?eY^2,t2+OOg]=<-= :}ҫ0n?tT;kiuݴMث{NpL'[^ϥt"=ørz{NpL'[^tKyDzN雇q:Ϳf3s]1>9qn'%]lc#ݽ_\38]O&k˧eyz=mw-4opɳv[|]y+kw=z=[^g#|Swx;h~y"7z= '}>hopz٢7^e,]=OKeE~'} v>hoSOzt쥓Ez\w2?iJ'}Or-{=0g} jgxNݵu_MW,O~VZzGL#}'3>hox#wzyƫŝ#1׷{A{{u{O>ꯍ+=z."N1'}m 7X{4 Ig,]#}3ӶA[Ï4G{:y>o3F橾L0IûvNc$=-?==Mכڵ|~ZjwM #>jkx!muzj}:}TmnO~owKWɳ?_w-ӷ7rx^kɖQxm4 ^Ji`o&~sW,M'<`tK6۷9]OzeZ:MWVW Okzw7Srzf?:u}3{7|Z}զꜶj;vKW2w~+)\'t;YoV"^·NPmuJynZ~v:錘6N]-[pUۨs;mm:צً^v|-kw'jcV;zm;uvN׷estc{m.M|o{:66髾Sg6Vڱ:!#u{/I|osy&Zi}T+to3 W{K{=vMNۢ[{uF{J2+ kGM^860]5mnI/Ѹt'l7vO=kgumMM:U&FOk:mçQ3|fZ=vM:;U6MWΫO[mn2mW~v>vN'0v.Ge+='㧭vG;m>=Ѽ~uS$F2^s}fwUS\=>c_et*ci}]X9{{Նo6;\#vצaozEL[Ï^??mktO)5YFW4Xڴ6}uWy- {6I+;[#ktKI-mWzK]K'>jt?gtGk|j~:gvίW0^hxi9 ޴s]ҽJ֝,O~]tr#krY|igVjind]\'Ӊ랗Nrdm[I՟qY{k#FѮHv/Kt#k6s#v-sk[;_i1ٍ뜟dyujV`vwGI;iwhkm>槓ؿpj:k,펓6֮+n mگ{l^~3OXiOgmn [ *N_{?ty1vOx]pgrk{~6^+]ݱӶ6ޓSR=u?>{Fw)mm;/g4M|s6{w*` %I?M{\s5O~iW;m 6}I{Mۤ?im~}ֹ>[3%+ܽ}G&}Y{O?it|K}pY=v(/-w(`N_qK6HNW?9B'6%mQ§j'woic.}i{uAۤktVn:sNg8-mQj'wik퀭"0WOۯHK6HGH׸~:ii>Y۸{Mu\jo`zz=_z_'].#}Wuu^Եlv'=0_OGмt%Ck]yRײsJڙt/!9t ahtstYuztB&[)=N=s XWO>=]&\>oS\^g3y SҮ$Pm-^~Js"w?uqM;:vobt]r&SҞ$!6[܎4<ݿK^+]2it6Mo}OezmMIWO7zwy8OMm.W:n 꾖h'tJڏdz}Gz_y8M۵O˾v,=(}>Fkn\giw߭mK9|6?hNקWujxOHu̽J !طK|b?OyZWKjxnQvVί{?]\]Hѹ) ;}Rvon-o:9.-۹.itOwȳ]X_ݛ=᯵<4,i/Ϲm8\{tO`}=w6mb}b׻tPlLF[V=w< _%u:86ik):ΔW3<=o >A{\&w-g P! ,Bu (=[~uw){Weyɝ/7jx'?Y y]i0eܓG=vwsL*w]d Z%Yf9׮qòE瘳G]+ZIT+w5} l?k}}Lz^}uyήm3 R)wn^x^ @Ϯ=sdYo7׏+R"?A yݟ]{<_W|s޽U P"ϖs'c{y\~j5ڻgҷ~rY}Bxr@Ǯ$}2d}n|xN'}X<$N[Y3ۻ#J^}n o'y^Vunw_Sw:y} fX; o';廷?W6{nr~|u*vհrEiDyL-dik]uqG:y}rOxl>b9L[cs|ÿTY_yoЇm9Qnr?ej'@g,wMHwkū<@g,w(>y|5MqRWzg o'Xd={]`D}_s$_[Y[F9>:Yʝ=W6G&:QֽeS6U~u\nƔ-e |tȖ2۶xyF9 |QU`&-ߊɍG6NnƔE ~lr0,p琅1es;[3|:7Zw`Y^vydM{-a5hEW`NY/7swv>y0,nG W લM\U<x^K0Ai]bPս&sph;mskmugӽgvgЍ-ZE~zGoiO} ^ V8O{_.`i`F-0VË~\Uixwx^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU TREE2@gkpoCs@wz~@[@.Ե@zM @l?@@^1@}P#@  o@B $@(a,404@7;@TREE9b_@bfyjLn@ruy}@k>@]0@֣|@O"Ⱥ@nA@`@3 @  R % @   { E @ 0 , ;I D@ 2I M P T@ ~X Q\ $`c@x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU x^àSU